Carmelo Andújar Fernández

Principal Investigator - SoilEvoEco Lab

Soil Biodiversity: Evolution, Phylogeny, and Biogeography of Soil Arthropods:

My research interests focus on the study of soil biodiversity, developing and applying new approaches based on high-throughput DNA sequencing for the study of phylogeny, biogeography, evolution, and ecology of soil-dwelling arthropod communities. The main goal is to enhance our understanding of the magnitude and distribution of this biodiversity, and of the eco-evolutionary processes involved in its generation and maintenance at both local and global scales. My work ranges from the methodological development of procedures necessary for the molecular study of hyperdiverse arthropod communities to the application of these methodologies to the study of ecological and evolutionary processes responsible for the generation, maintenance, and distribution of soil biodiversity.

Currently, my primary focus is on studying the soil (phylo)(beta)diversity of endogean arthropods based on high-throughput sequencing (HTS) approaches, with ongoing projects to characterize soil arthropod richness, biodiversity patterns and driving processes (i) in the Canary Islands (SoilBioDiv project) and (ii) for a selection of forest biomes worldwide (EdAFoBio project).

I am also particularly interested in the calibration of the molecular clock, as well as in the evolution and phylogeny of endogean lineages of Coleoptera, including Carabid beetles (Tribes Anillini and Zuphiini), among others. Furthermore, I am engaged in methods for species delineation and taxonomy by integrating multiple lines of evidence.

Ongoing projects as PI:

EdAFoBio: Project to study the magnitude and betadiversity patterns of soil arthropod biodiversity in forest biomes worldwide.

Period: x

See the EdAFoBio project webpage

For a complete list of projects see

or

Academic path:

I earned my PhD from the University of Murcia in 2012. My doctoral research was centered on the molecular systematics, molecular clock calibration, and exploration of diversification and hybridisation processes within the subgenus Mesocarabus. This period also included significant work on the systematics of endogean Coleoptera and investigations into the ecology and evolution of aquatic beetles. In February 2013, I embarked on a postdoctoral fellowship at Imperial College London & the Natural History Museum of London, lasting 3.5 years. This phase of my career was marked by the development of a distinctive research trajectory, focusing on understanding the diversity and phylogenetic structure of complex, highly diverse biological communities. My emphasis was on soil arthropods, for which I developed and utilized innovative high throughput sequencing (HTS) techniques, alongside conducting studies on the evolution and phylogenetics of aquatic and subterranean Coleoptera.

In 2016, I transitioned to the CSIC in Tenerife, supported by a Marie Skłodowska-Curie Individual Fellowship. During this time, I spearheaded a three-year project under the Spanish National Plan (JIN), investigating the impacts of insularity, vegetation types, aridity, and introduced species on the soil biodiversity of the Canary Islands. My career reached another milestone in 2022 when I was honored with a Ramón and Cajal contract, furthering my opportunity to advance my research areas and the activities of the SoilEvoEco Lab.

Summary on publication record, projects, and conferences/workshops:

(updated 22-07-23)

(1) Number of SCI publications = 54 (20 as first author, 14 as second author, 6 as senior author; 39 of them Q1, 34 first percentile), including: Molecular Biology and Evolution (x1), Ecology Letters (x1), Molecular Ecology (x14), Gigascience (x1), Gobal Ecology and Biogeography (x1), Cladistics (x1), Methods in Ecology and Evolution (x3), Molecular Ecology Resources (x3), Journal of Biogeography (x3); Molecular Phylogenetics and Evolution (x2), BMC Evolutionary Biology (x1), Proceedings of the Royal Society B (x2), Zoological Journal of the Linnean Society (x1), Zoologica Scripta (x1), Arthropod Systematics & Phylogeny (x2), Systematic Entomology (x1), Frontiers in zoology (x1), Mt DNA (x3), Zootaxa (x4), Acta Entomologica Musei Nationalis Pragae (x1), Zookeys (x1), Subterranean Biology (x2), Journal of Zoological systematics and Evolutionary Research (x1), PlosOne (x1); (2) Scientific non-SCI publications = 14; (3) Book chapters = 4;  (4) H-index = 24, i10-index = 35, Citations = 1710 (Google Scholar 22/07/23); (5) Projects as PI/co-PI = 9; (6) Projects in which I have participated = 38 (11 of them international);  (7) Conferences/workshops = 24 (5 as invited speaker).

I was awarded the prestigious 20th R.J.H. HINTELMANN SCIENTIFIC AWARD in 2018 for young evolutionary biologist by the Zoologische Staatssammlung München. 

Highlighted publications:

2021

ANDÚJAR, C. (AC); Creedy, T.J.; Arribas, … Emerson, B.C. (1/8)

Validated removal of nuclear pseudogenes and sequencing artefacts from mitochondrial metabarcode data

Molecular Ecology Resources, 21, pp.

1772-1787

ISSN1755098X

Number of citations:40

2019

Arribas, P.; ANDÚJAR, C.; Moraza, M.L.; Linard, B.; Emerson,B.C.; Vogler, A. (2/6)

Mitochondrial metagenomics reveals the ancient origin and phylodiversity of soil mites and provides a phylogeny of the Acari.

Molecular Biology and Evolution. 37, pp.

683-694

ISSN0737-4038

Number of citations:48

2018

ANDÚJAR, C. (AC); Arribas, P.; Gray, C.; Bruce, K.; Woodward,G.; Yu, W.Y.; Vogler, A. (1/7)

Metabarcoding of freshwater invertebrates to detect the effects of a pesticide spill.

Molecular Ecology. 27, pp

146-166

ISSN1365-294X

Number of citations:65

2018

ANDÚJAR, C. (AC); Arribas, P.; Yy, W.Y.; Vogler, A.; Emerson, B.C. (1/5)

Why the COI barcode should be the community DNA metabarcode for the Metazoa.

Molecular Ecology 27, pp

3968-3975

ISSN1365-294X

Number of citations:150

2017

ANDÚJAR, C. (AC); Pérez-González, S.; Arribas, P.; Zaballos,J.P.; Vogler, A.P.; Ribera, I. (1/6)

Speciation below ground: Tempo and mode of diversification in a radiation of euedaphic ground beetles.

Molecular Ecology 26, pp

6053-6070

ISSN1365-294X

Number of citations:21

2016

ANDÚJAR, C. (AC); Faille, A.; Pérez, S.; Zaballos, J.;Vogler, A.P.; Ribera, I. (1/6)

Gondwanian relicts and oceanic dispersal in a cosmopolitan radiation of euedaphic ground beetles.

Molecular Phylogenetics and Evolution. 99, pp

235-246

ISSN1055-7903

Number of citations:28

2016

Bocak, L.; ANDÚJAR, C.; Kundrata, R.; Vogler, A.P. (2/4)

The discovery of Iberobaeniidae (Coleoptera: Elateroidea), a new family of beetles from Spain with immatures detected by environmental DNA sequencing.

Proceedings of the Royal Society of London B.

ISSN1471-2954.9

Number of citations:65

2015

ANDÚJAR, C. (AC); Arribas, P.; Ruzicka, F.; Crampton-Platt,A.; Timmermans, M.J., A.; Vogler, A.(1/6)

Phylogenetic community ecology of soil biodiversity using mitochondrial metagenomics.

Molecular Ecology. 24, pp

3603-3617

ISSN1365-294X

2014

ANDÚJAR, C. (AC); Arribas, P.; Ruiz, C.; Serrano, J.; Gómez-Zurita, J. (1/5)

Integration of conflict into Integrative Taxonomy: Fitting hybridization in species delimitation of Mesocarabus (Coleoptera: Carabidae).

Molecular Ecology. 17, pp

4344-4361

ISSN1365-294X

2012

ANDÚJAR, C. (AC); Serrano, J.; Gómez-Zurita, J. (1/3)

Winding up the molecular clock in the genus Carabus (Coleoptera: Carabidae): assessment of methodological decisions on rate and node age estimation.

BMC Evolutionary Biology

12, 40

ISSN1471-2148

Number of citations:132

Highlighted projects:

Global Survey of Edaphic Arthropod Forest Biodiversity: understanding the eco-evolutionary patterns and processes of diversification and community assembly of soil forest arthropods (EdAFoBio).

Funding Entity:

MINISTERIO DE CIENCIA E INNOVACIÓN

266.000 €

Period:

01/09/2023 - 01/09/2017

PI: CARMELO ANDÚJAR (IPNA-CSIC)

Team role:

PI

The utility of mitogenomics and metabarcoding as molecular tools for insect identification

Funding Entity:

CANADIAN FOOD INSPECTION AGENCY - CSIC

56.625 €

Period:

01/04/2021 - 01/04/2024

PI: CARMELO ANDÚJAR. (IPNA-CSIC)

Team role:

PI

Biodiversity Genomics Europe.

Funding Entity:

European Commission

20.078.543 €

Period:

From 01/09/2022

PI: B. Emerson (IPNA-CSIC)

Team role:

Team member

PID2021-126883NA-I00, Mesofauna introduction in island soils: invasion patterns, drivers and tools for insular biosecurity and conservation of soil biodiversity.

Funding Entity:

MINISTERIO DE CIENCIA E INNOVACIÓN.

139.150 €

Period:

01/09/2022 - 01/09/2025

PI: P. Arribas. (IPNA-CSIC)

Team role:

Team member

iBioGen: Twinning for European excellence in Island Biodiversity Genomics.

Funding Entity:

Comisión Europea

999.332 €

Period:

01/09/2018 - 31/10/2021

PI: A. Papadopoulou. (University of Cyprus)

Team role:

Team member and postdoctoral contract

Hacia una restauración integral de los bosques de laurisilva y su fauna invertebrada.

Funding Entity:

Fundación Caja Canarias / Obra Social La Caixa

53.700 €

Period:

01/03/2018 - 01/03/2021

PI: B.C. Emerson; CoPI: CARMELO ANDÚJAR. (IPNA-CSIC)

Team role:

Co-PI and postdoctoral contract

CGL2015-74178-JIN, Biodiversidad del suelo a múltiples escalas: Nuevos procedimientos para la medición y el estudio de las comunidades de artrópodos edáficos.

Funding Entity:

MINECO

166.000 €

Period:

16/02/2017-15/02/202

PI: CARMELO ANDÚJAR. (IPNA-CSIC).

Team role:

PI

EQC2018-004418-P, Instalación Genética/genómica automatizada para análisis de Alto Rendimiento de la Biodiversidad (IGAR-Biodiv).

Funding Entity:

Ministerio de Ciencia e Innovación

361.769,72 €

Period:

2019-2019

PI: B.C. Emerson. (IPNA-CSIC)

Team role:

Team member

Biodiversity Initiative: Site-based integrative analysis of biodiversity in tropical rainforests.

Funding Entity:

Natural History Museum.

328.879 €

Period:

2013 - 2018

PI: A. Vogler. (Natural History Museum of London)

Team role:

Team member and postdoctoral contract

MSCA-IF-2015-705639, SOILBIODIV: Beyond the limits of scale: a novel pipeline for the measurement of soil arthropod biodiversity.

Funding Entity:

European Commission

90.000 €

Period:

01/07/2016 - 15/02/2017

PI: CARMELO ANDÚJAR. (IPNA-CSIC)

Team role:

PI